Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd1Q9D0E3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm38227-201ENSMUST00000193036 1602 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm8864-201ENSMUST00000118653 1010 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm4917-201ENSMUST00000121452 650 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm14048-201ENSMUST00000121864 1268 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm25770-201ENSMUST00000158566 115 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm23563-201ENSMUST00000174900 251 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm7539-201ENSMUST00000189789 630 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm37944-201ENSMUST00000194233 414 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd1Q9D0E3 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Gm11546-201ENSMUST00000120297 354 ntBASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Gm25804-201ENSMUST00000122785 188 ntBASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Gm44460-201ENSMUST00000196179 129 ntBASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lysmd1Q9D0E3 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms