Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm22920-201ENSMUST00000102175 109 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm25880-201ENSMUST00000104331 132 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm13916-201ENSMUST00000117368 628 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm12899-201ENSMUST00000120565 551 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm29499-201ENSMUST00000189151 486 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm28329-201ENSMUST00000191208 689 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm29171-201ENSMUST00000191397 486 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm37028-201ENSMUST00000194276 107 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps53Q8CCB4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vps53Q8CCB4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps53Q8CCB4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.21□□□□□ -0.3
Vps53Q8CCB4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps53Q8CCB4 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Vps53Q8CCB4 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps53Q8CCB4 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps53Q8CCB4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms