Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usp44Q8C2S0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Gm5302-201ENSMUST00000202130 796 ntBASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.22□□□□□ -0.29
Usp44Q8C2S0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp44Q8C2S0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC13.22□□□□□ -0.29
Usp44Q8C2S0 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Gm9133-201ENSMUST00000118289 540 ntBASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Mt1-202ENSMUST00000211807 1085 ntBASIC13.21□□□□□ -0.29
Usp44Q8C2S0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp44Q8C2S0 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.21□□□□□ -0.3
Usp44Q8C2S0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp44Q8C2S0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp44Q8C2S0 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp44Q8C2S0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp44Q8C2S0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp44Q8C2S0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp44Q8C2S0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Usp44Q8C2S0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp44Q8C2S0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp44Q8C2S0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp44Q8C2S0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.2□□□□□ -0.3
Usp44Q8C2S0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Usp44Q8C2S0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Usp44Q8C2S0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp44Q8C2S0 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp44Q8C2S0 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp44Q8C2S0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms