Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClpbQ60649 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ClpbQ60649 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
ClpbQ60649 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.9□□□□□ -0.66
ClpbQ60649 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpbQ60649 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Gm22920-201ENSMUST00000102175 109 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.9□□□□□ -0.66
ClpbQ60649 Gm11956-201ENSMUST00000119525 512 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpbQ60649 Gm4726-201ENSMUST00000135604 736 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Gm6019-201ENSMUST00000148369 736 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpbQ60649 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Gm19459-201ENSMUST00000176240 835 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Gm12407-201ENSMUST00000180219 324 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Mir8093-201ENSMUST00000185043 137 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.9□□□□□ -0.66
ClpbQ60649 Gm43852-201ENSMUST00000202098 917 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpbQ60649 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ClpbQ60649 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.9□□□□□ -0.66
ClpbQ60649 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.9□□□□□ -0.66
ClpbQ60649 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ClpbQ60649 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ClpbQ60649 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClpbQ60649 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ClpbQ60649 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
ClpbQ60649 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
ClpbQ60649 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ClpbQ60649 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.9□□□□□ -0.67
ClpbQ60649 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.9□□□□□ -0.67
ClpbQ60649 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ClpbQ60649 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm11500-201ENSMUST00000118237 601 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Gm15352-201ENSMUST00000118696 270 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Gm8737-201ENSMUST00000122208 642 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.89□□□□□ -0.67
ClpbQ60649 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm3150-201ENSMUST00000166418 204 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.89□□□□□ -0.67
ClpbQ60649 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm44506-201ENSMUST00000206278 965 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Gm45770-201ENSMUST00000212105 616 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms