Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm23949-201ENSMUST00000104027 127 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm15610-201ENSMUST00000120584 195 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.01□□□□□ -0.81
Sec61a1P61620 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.01□□□□□ -0.81
Sec61a1P61620 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a1P61620 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a1P61620 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Gm5740-201ENSMUST00000211003 1857 ntBASIC10□□□□□ -0.81
Sec61a1P61620 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Gm9035-201ENSMUST00000218318 1697 ntBASIC10□□□□□ -0.81
Sec61a1P61620 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Gm6039-201ENSMUST00000121667 1250 ntBASIC10□□□□□ -0.81
Sec61a1P61620 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10□□□□□ -0.81
Sec61a1P61620 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10□□□□□ -0.81
Sec61a1P61620 Gm28071-201ENSMUST00000190355 478 ntBASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms