Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smg6P61406 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smg6P61406 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smg6P61406 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smg6P61406 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smg6P61406 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smg6P61406 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.59■□□□□ 0.09
Smg6P61406 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC15.59■□□□□ 0.09
Smg6P61406 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smg6P61406 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smg6P61406 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.59■□□□□ 0.09
Smg6P61406 Gm6722-201ENSMUST00000221586 390 ntBASIC15.59■□□□□ 0.09
Smg6P61406 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC15.59■□□□□ 0.09
Smg6P61406 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smg6P61406 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Smg6P61406 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smg6P61406 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smg6P61406 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Smg6P61406 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Smg6P61406 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC15.58■□□□□ 0.08
Smg6P61406 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Smg6P61406 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.58■□□□□ 0.08
Smg6P61406 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.58■□□□□ 0.08
Smg6P61406 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Gm4294-201ENSMUST00000105169 614 ntBASIC15.58■□□□□ 0.08
Smg6P61406 Gm1848-201ENSMUST00000120711 789 ntBASIC15.58■□□□□ 0.08
Smg6P61406 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC15.58■□□□□ 0.08
Smg6P61406 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Smg6P61406 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.58■□□□□ 0.08
Smg6P61406 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC15.58■□□□□ 0.08
Smg6P61406 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC15.58■□□□□ 0.08
Smg6P61406 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Smg6P61406 Gm44329-201ENSMUST00000197469 112 ntBASIC15.58■□□□□ 0.08
Smg6P61406 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC15.58■□□□□ 0.08
Smg6P61406 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.58■□□□□ 0.08
Smg6P61406 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.58■□□□□ 0.08
Smg6P61406 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Smg6P61406 AC154314.2-201ENSMUST00000223677 3502 ntBASIC15.58■□□□□ 0.08
Smg6P61406 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smg6P61406 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Smg6P61406 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smg6P61406 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Smg6P61406 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smg6P61406 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Smg6P61406 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Smg6P61406 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smg6P61406 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smg6P61406 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.57■□□□□ 0.08
Smg6P61406 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.57■□□□□ 0.08
Smg6P61406 Gm14942-201ENSMUST00000119642 336 ntBASIC15.57■□□□□ 0.08
Smg6P61406 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Gm21778-201ENSMUST00000178779 471 ntBASIC15.57■□□□□ 0.08
Smg6P61406 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC15.57■□□□□ 0.08
Smg6P61406 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.57■□□□□ 0.08
Smg6P61406 AC160929.1-201ENSMUST00000221247 415 ntBASIC15.57■□□□□ 0.08
Smg6P61406 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.57■□□□□ 0.08
Smg6P61406 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smg6P61406 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smg6P61406 Gm23105-201ENSMUST00000083719 134 ntBASIC15.57■□□□□ 0.08
Smg6P61406 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smg6P61406 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Smg6P61406 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smg6P61406 AC109214.1-201ENSMUST00000219520 1372 ntBASIC15.56■□□□□ 0.08
Smg6P61406 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smg6P61406 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC15.56■□□□□ 0.08
Smg6P61406 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smg6P61406 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Smg6P61406 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms