Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.21□□□□□ -0.94
Cdx1P18111 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.21□□□□□ -0.94
Cdx1P18111 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.2□□□□□ -0.94
Cdx1P18111 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Cdx1P18111 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Gm12058-201ENSMUST00000118614 437 ntBASIC9.2□□□□□ -0.94
Cdx1P18111 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.2□□□□□ -0.94
Cdx1P18111 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Gm2260-201ENSMUST00000184965 657 ntBASIC9.2□□□□□ -0.94
Cdx1P18111 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 Gm44967-201ENSMUST00000207047 631 ntBASIC9.2□□□□□ -0.94
Cdx1P18111 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Cdx1P18111 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.2□□□□□ -0.94
Cdx1P18111 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Cdx1P18111 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cdx1P18111 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.2□□□□□ -0.94
Cdx1P18111 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Cdx1P18111 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Cdx1P18111 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.19□□□□□ -0.94
Cdx1P18111 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Cdx1P18111 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Gm4909-201ENSMUST00000118749 794 ntBASIC9.19□□□□□ -0.94
Cdx1P18111 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.19□□□□□ -0.94
Cdx1P18111 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.19□□□□□ -0.94
Cdx1P18111 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.19□□□□□ -0.94
Cdx1P18111 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Gm27046-201ENSMUST00000182160 463 ntBASIC9.19□□□□□ -0.94
Cdx1P18111 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.19□□□□□ -0.94
Cdx1P18111 Gm3096-201ENSMUST00000185770 364 ntBASIC9.19□□□□□ -0.94
Cdx1P18111 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.19□□□□□ -0.94
Cdx1P18111 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.19□□□□□ -0.94
Cdx1P18111 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Cdx1P18111 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Cdx1P18111 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.19□□□□□ -0.94
Cdx1P18111 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Cdx1P18111 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.19□□□□□ -0.94
Cdx1P18111 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cdx1P18111 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms