Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.49□□□□□ -0.41
Trdmt1O55055 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.49□□□□□ -0.41
Trdmt1O55055 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdmt1O55055 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Trdmt1O55055 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Gm25226-201ENSMUST00000158198 123 ntBASIC12.48□□□□□ -0.41
Trdmt1O55055 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Gm19927-201ENSMUST00000185792 781 ntBASIC12.48□□□□□ -0.41
Trdmt1O55055 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trdmt1O55055 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.48□□□□□ -0.41
Trdmt1O55055 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdmt1O55055 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trdmt1O55055 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.47□□□□□ -0.41
Trdmt1O55055 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trdmt1O55055 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.47□□□□□ -0.41
Trdmt1O55055 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trdmt1O55055 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trdmt1O55055 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Snord17-201ENSMUST00000104526 238 ntBASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm15136-201ENSMUST00000120552 533 ntBASIC12.47□□□□□ -0.41
Trdmt1O55055 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm12906-201ENSMUST00000154610 441 ntBASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm26119-201ENSMUST00000175601 104 ntBASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.47□□□□□ -0.41
Trdmt1O55055 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.47□□□□□ -0.41
Trdmt1O55055 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trdmt1O55055 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.47□□□□□ -0.41
Trdmt1O55055 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trdmt1O55055 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms