Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CroccQ8CJ40 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CroccQ8CJ40 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
CroccQ8CJ40 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.83□□□□□ -0.68
CroccQ8CJ40 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.83□□□□□ -0.68
CroccQ8CJ40 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.83□□□□□ -0.68
CroccQ8CJ40 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.83□□□□□ -0.68
CroccQ8CJ40 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CroccQ8CJ40 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.82□□□□□ -0.68
CroccQ8CJ40 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm44323-201ENSMUST00000198689 129 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm44315-201ENSMUST00000203041 219 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm23105-201ENSMUST00000083719 134 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CroccQ8CJ40 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.82□□□□□ -0.68
CroccQ8CJ40 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms