Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm19994-201ENSMUST00000217086 586 ntBASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm10434-201ENSMUST00000101158 471 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm6023-201ENSMUST00000118217 606 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm24548-201ENSMUST00000158650 108 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm18893-201ENSMUST00000198416 943 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm5035-201ENSMUST00000215581 927 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco3Q8BQM7 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco3Q8BQM7 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco3Q8BQM7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Smco3Q8BQM7 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco3Q8BQM7 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC9.31□□□□□ -0.92
Smco3Q8BQM7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco3Q8BQM7 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smco3Q8BQM7 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smco3Q8BQM7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms