Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf168Q80XJ2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf168Q80XJ2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf168Q80XJ2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf168Q80XJ2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf168Q80XJ2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf168Q80XJ2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf168Q80XJ2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf168Q80XJ2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm25880-201ENSMUST00000104331 132 ntBASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm7741-201ENSMUST00000181445 989 ntBASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm7593-201ENSMUST00000187246 644 ntBASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm5100-201ENSMUST00000195631 589 ntBASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf168Q80XJ2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Gm23105-201ENSMUST00000083719 134 ntBASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf168Q80XJ2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms