Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scn9aQ62205 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn9aQ62205 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scn9aQ62205 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.15□□□□□ -0.3
Scn9aQ62205 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 AC090962.2-201ENSMUST00000225064 1801 ntBASIC13.15□□□□□ -0.3
Scn9aQ62205 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scn9aQ62205 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn9aQ62205 Defa-ps17-201ENSMUST00000121849 171 ntBASIC13.15□□□□□ -0.3
Scn9aQ62205 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Scn9aQ62205 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Gm45745-201ENSMUST00000211447 1180 ntBASIC13.15□□□□□ -0.3
Scn9aQ62205 Gm10238-201ENSMUST00000089689 408 ntBASIC13.15□□□□□ -0.3
Scn9aQ62205 Gm8420-201ENSMUST00000097103 598 ntBASIC13.15□□□□□ -0.3
Scn9aQ62205 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn9aQ62205 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm16441-201ENSMUST00000138176 924 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC13.14□□□□□ -0.31
Scn9aQ62205 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm15258-201ENSMUST00000153801 741 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Kif4-ps-202ENSMUST00000185083 652 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm42687-201ENSMUST00000199075 164 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm33080-201ENSMUST00000205429 172 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm9701-201ENSMUST00000077976 427 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Scn9aQ62205 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.14□□□□□ -0.31
Scn9aQ62205 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn9aQ62205 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Scn9aQ62205 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Scn9aQ62205 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn9aQ62205 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Scn9aQ62205 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Scn9aQ62205 Gm11540-201ENSMUST00000117457 780 ntBASIC13.13□□□□□ -0.31
Scn9aQ62205 Gm14148-201ENSMUST00000122433 1008 ntBASIC13.13□□□□□ -0.31
Scn9aQ62205 Mir1893-201ENSMUST00000122565 83 ntBASIC13.13□□□□□ -0.31
Scn9aQ62205 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC13.13□□□□□ -0.31
Scn9aQ62205 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn9aQ62205 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC13.13□□□□□ -0.31
Scn9aQ62205 Mir341-201ENSMUST00000093593 96 ntBASIC13.13□□□□□ -0.31
Scn9aQ62205 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms