Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Gm45224-201ENSMUST00000208203 414 ntBASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Fndc4Q3TR08 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm11511-201ENSMUST00000118146 540 ntBASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm13996-201ENSMUST00000118456 430 ntBASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm6114-201ENSMUST00000182472 968 ntBASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm8956-201ENSMUST00000203939 825 ntBASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Fndc4Q3TR08 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Mir877-201ENSMUST00000104738 85 ntBASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.67□□□□□ -0.86
Fndc4Q3TR08 Gm17812-201ENSMUST00000204935 318 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms