Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col1a2Q01149 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col1a2Q01149 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col1a2Q01149 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col1a2Q01149 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col1a2Q01149 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col1a2Q01149 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.13□□□□□ -0.15
Col1a2Q01149 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col1a2Q01149 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col1a2Q01149 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Gm5641-201ENSMUST00000091130 1488 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Gm23612-201ENSMUST00000103823 110 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Gm5944-201ENSMUST00000118182 1001 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Gm24328-201ENSMUST00000175104 67 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 Gm23576-201ENSMUST00000179918 110 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 Platr10-202ENSMUST00000191479 818 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 Gm5700-201ENSMUST00000191483 989 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col1a2Q01149 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC14.12□□□□□ -0.15
Col1a2Q01149 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 AC090962.2-201ENSMUST00000225064 1801 ntBASIC14.12□□□□□ -0.15
Col1a2Q01149 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col1a2Q01149 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col1a2Q01149 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.11□□□□□ -0.15
Col1a2Q01149 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC14.11□□□□□ -0.15
Col1a2Q01149 Gm11578-201ENSMUST00000118530 459 ntBASIC14.11□□□□□ -0.15
Col1a2Q01149 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.11□□□□□ -0.15
Col1a2Q01149 Gm44647-201ENSMUST00000207402 428 ntBASIC14.11□□□□□ -0.15
Col1a2Q01149 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.11□□□□□ -0.15
Col1a2Q01149 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col1a2Q01149 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col1a2Q01149 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col1a2Q01149 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Gm11380-201ENSMUST00000118067 560 ntBASIC14.1□□□□□ -0.15
Col1a2Q01149 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Col1a2Q01149 Gm13019-201ENSMUST00000120000 276 ntBASIC14.1□□□□□ -0.15
Col1a2Q01149 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.1□□□□□ -0.15
Col1a2Q01149 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.1□□□□□ -0.15
Col1a2Q01149 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col1a2Q01149 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.1□□□□□ -0.15
Col1a2Q01149 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.1□□□□□ -0.15
Col1a2Q01149 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col1a2Q01149 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col1a2Q01149 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms