Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.66□□□□□ -0.54
Sox1P53783 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox1P53783 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox1P53783 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sox1P53783 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox1P53783 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox1P53783 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.66□□□□□ -0.54
Sox1P53783 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.65□□□□□ -0.54
Sox1P53783 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox1P53783 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sox1P53783 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox1P53783 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sox1P53783 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sox1P53783 Gm15374-201ENSMUST00000119313 844 ntBASIC11.65□□□□□ -0.54
Sox1P53783 H2afy3-201ENSMUST00000151919 1112 ntBASIC11.65□□□□□ -0.54
Sox1P53783 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.65□□□□□ -0.54
Sox1P53783 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.65□□□□□ -0.54
Sox1P53783 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.65□□□□□ -0.54
Sox1P53783 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox1P53783 Gm18164-201ENSMUST00000213769 927 ntBASIC11.65□□□□□ -0.54
Sox1P53783 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC11.65□□□□□ -0.54
Sox1P53783 Gm18166-201ENSMUST00000215557 927 ntBASIC11.65□□□□□ -0.54
Sox1P53783 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC11.65□□□□□ -0.54
Sox1P53783 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Sox1P53783 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sox1P53783 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox1P53783 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.65□□□□□ -0.54
Sox1P53783 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sox1P53783 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Sox1P53783 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox1P53783 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Sox1P53783 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Sox1P53783 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox1P53783 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.65□□□□□ -0.55
Sox1P53783 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Sox1P53783 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.55
Sox1P53783 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox1P53783 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox1P53783 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox1P53783 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Sox1P53783 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox1P53783 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox1P53783 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox1P53783 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.64□□□□□ -0.55
Sox1P53783 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Gm14699-201ENSMUST00000122340 228 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox1P53783 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sox1P53783 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Sox1P53783 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Gm8643-201ENSMUST00000195228 625 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox1P53783 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.64□□□□□ -0.55
Sox1P53783 Gm2566-201ENSMUST00000201267 431 ntBASIC11.64□□□□□ -0.55
Sox1P53783 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox1P53783 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.64□□□□□ -0.55
Sox1P53783 AC163638.2-201ENSMUST00000224920 827 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Gm23458-201ENSMUST00000083257 169 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Gm4778-201ENSMUST00000098878 1098 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms