Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm5944-201ENSMUST00000118182 1001 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm16547-201ENSMUST00000159474 293 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm27956-201ENSMUST00000175604 260 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm37782-201ENSMUST00000194879 678 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC14.66□□□□□ -0.06
Hoxc9P09633 AC164429.1-201ENSMUST00000224210 518 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm9791-201ENSMUST00000060997 447 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm43127-201ENSMUST00000195890 2789 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm44740-201ENSMUST00000205603 1614 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Hoxc9P09633 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.65□□□□□ -0.06
Hoxc9P09633 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Gm14113-201ENSMUST00000121399 976 ntBASIC14.65□□□□□ -0.06
Hoxc9P09633 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hoxc9P09633 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC14.65□□□□□ -0.06
Hoxc9P09633 Gm18733-202ENSMUST00000174447 401 ntBASIC14.65□□□□□ -0.06
Hoxc9P09633 Gm25998-201ENSMUST00000175397 53 ntBASIC14.65□□□□□ -0.06
Hoxc9P09633 Gm42751-201ENSMUST00000198065 559 ntBASIC14.65□□□□□ -0.06
Hoxc9P09633 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hoxc9P09633 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hoxc9P09633 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Hoxc9P09633 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Gm6641-201ENSMUST00000196100 1315 ntBASIC14.65□□□□□ -0.06
Hoxc9P09633 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14.65□□□□□ -0.06
Hoxc9P09633 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxc9P09633 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.64□□□□□ -0.07
Hoxc9P09633 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hoxc9P09633 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Hoxc9P09633 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Hoxc9P09633 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC14.64□□□□□ -0.07
Hoxc9P09633 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Gm45094-201ENSMUST00000207013 617 ntBASIC14.64□□□□□ -0.07
Hoxc9P09633 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC14.64□□□□□ -0.07
Hoxc9P09633 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.64□□□□□ -0.07
Hoxc9P09633 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Hoxc9P09633 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
Hoxc9P09633 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms