Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Herpud2Q9JJC9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.37■□□□□ 0.85
Herpud2Q9JJC9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herpud2Q9JJC9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herpud2Q9JJC9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herpud2Q9JJC9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Herpud2Q9JJC9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herpud2Q9JJC9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Herpud2Q9JJC9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herpud2Q9JJC9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Herpud2Q9JJC9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Herpud2Q9JJC9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Herpud2Q9JJC9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Herpud2Q9JJC9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herpud2Q9JJC9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herpud2Q9JJC9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herpud2Q9JJC9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.35■□□□□ 0.85
Herpud2Q9JJC9 Gm5874-201ENSMUST00000096101 508 ntBASIC20.35■□□□□ 0.85
Herpud2Q9JJC9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herpud2Q9JJC9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Herpud2Q9JJC9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Herpud2Q9JJC9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herpud2Q9JJC9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Herpud2Q9JJC9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Herpud2Q9JJC9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Herpud2Q9JJC9 Gm43060-201ENSMUST00000200621 289 ntBASIC20.34■□□□□ 0.85
Herpud2Q9JJC9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Herpud2Q9JJC9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.34■□□□□ 0.85
Herpud2Q9JJC9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Herpud2Q9JJC9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Herpud2Q9JJC9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Herpud2Q9JJC9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Herpud2Q9JJC9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Herpud2Q9JJC9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Herpud2Q9JJC9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Herpud2Q9JJC9 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.33■□□□□ 0.84
Herpud2Q9JJC9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Herpud2Q9JJC9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Herpud2Q9JJC9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Herpud2Q9JJC9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Herpud2Q9JJC9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Herpud2Q9JJC9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Herpud2Q9JJC9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Herpud2Q9JJC9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Herpud2Q9JJC9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Herpud2Q9JJC9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Herpud2Q9JJC9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Herpud2Q9JJC9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Herpud2Q9JJC9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Herpud2Q9JJC9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.29■□□□□ 0.84
Herpud2Q9JJC9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Herpud2Q9JJC9 Smad6-203ENSMUST00000179458 273 ntBASIC20.29■□□□□ 0.84
Herpud2Q9JJC9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Herpud2Q9JJC9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Herpud2Q9JJC9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Herpud2Q9JJC9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Herpud2Q9JJC9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.28■□□□□ 0.84
Herpud2Q9JJC9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Herpud2Q9JJC9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.28■□□□□ 0.84
Herpud2Q9JJC9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Herpud2Q9JJC9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Herpud2Q9JJC9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Herpud2Q9JJC9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Herpud2Q9JJC9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Herpud2Q9JJC9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Herpud2Q9JJC9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Herpud2Q9JJC9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.27■□□□□ 0.84
Herpud2Q9JJC9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Herpud2Q9JJC9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Herpud2Q9JJC9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Herpud2Q9JJC9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Herpud2Q9JJC9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Herpud2Q9JJC9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Herpud2Q9JJC9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms