Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Upk3bl1Q9D701 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk3bl1Q9D701 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk3bl1Q9D701 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.45■□□□□ 0.54
Upk3bl1Q9D701 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.45■□□□□ 0.54
Upk3bl1Q9D701 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Upk3bl1Q9D701 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk3bl1Q9D701 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Upk3bl1Q9D701 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Upk3bl1Q9D701 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Upk3bl1Q9D701 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bl1Q9D701 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.42■□□□□ 0.54
Upk3bl1Q9D701 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bl1Q9D701 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bl1Q9D701 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bl1Q9D701 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk3bl1Q9D701 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk3bl1Q9D701 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk3bl1Q9D701 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Upk3bl1Q9D701 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Upk3bl1Q9D701 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Upk3bl1Q9D701 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Upk3bl1Q9D701 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Upk3bl1Q9D701 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk3bl1Q9D701 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk3bl1Q9D701 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Upk3bl1Q9D701 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.38■□□□□ 0.53
Upk3bl1Q9D701 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk3bl1Q9D701 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk3bl1Q9D701 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk3bl1Q9D701 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk3bl1Q9D701 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk3bl1Q9D701 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Upk3bl1Q9D701 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Upk3bl1Q9D701 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bl1Q9D701 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Gm8503-201ENSMUST00000118131 455 ntBASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms