Protein–RNA interactions for Protein: Q9D6C3

3830403N18Rik, MCG113545, isoform CRA_a, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3830403N18RikQ9D6C3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
3830403N18RikQ9D6C3 Gm13238-201ENSMUST00000117655 780 ntBASIC21.46■■□□□ 1.03
3830403N18RikQ9D6C3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
3830403N18RikQ9D6C3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
3830403N18RikQ9D6C3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
3830403N18RikQ9D6C3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
3830403N18RikQ9D6C3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
3830403N18RikQ9D6C3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
3830403N18RikQ9D6C3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
3830403N18RikQ9D6C3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
3830403N18RikQ9D6C3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
3830403N18RikQ9D6C3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
3830403N18RikQ9D6C3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
3830403N18RikQ9D6C3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
3830403N18RikQ9D6C3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
3830403N18RikQ9D6C3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
3830403N18RikQ9D6C3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
3830403N18RikQ9D6C3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
3830403N18RikQ9D6C3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
3830403N18RikQ9D6C3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
3830403N18RikQ9D6C3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.44■■□□□ 1.02
3830403N18RikQ9D6C3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
3830403N18RikQ9D6C3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
3830403N18RikQ9D6C3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
3830403N18RikQ9D6C3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
3830403N18RikQ9D6C3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
3830403N18RikQ9D6C3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
3830403N18RikQ9D6C3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.42■■□□□ 1.02
3830403N18RikQ9D6C3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
3830403N18RikQ9D6C3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
3830403N18RikQ9D6C3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
3830403N18RikQ9D6C3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
3830403N18RikQ9D6C3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
3830403N18RikQ9D6C3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
3830403N18RikQ9D6C3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
3830403N18RikQ9D6C3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
3830403N18RikQ9D6C3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
3830403N18RikQ9D6C3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.41■■□□□ 1.02
3830403N18RikQ9D6C3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
3830403N18RikQ9D6C3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
3830403N18RikQ9D6C3 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.4■■□□□ 1.02
3830403N18RikQ9D6C3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.4■■□□□ 1.02
3830403N18RikQ9D6C3 Gm10399-202ENSMUST00000202768 748 ntBASIC21.4■■□□□ 1.02
3830403N18RikQ9D6C3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
3830403N18RikQ9D6C3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
3830403N18RikQ9D6C3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
3830403N18RikQ9D6C3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
3830403N18RikQ9D6C3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
3830403N18RikQ9D6C3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
3830403N18RikQ9D6C3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
3830403N18RikQ9D6C3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.39■■□□□ 1.01
3830403N18RikQ9D6C3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.39■■□□□ 1.01
3830403N18RikQ9D6C3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
3830403N18RikQ9D6C3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
3830403N18RikQ9D6C3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
3830403N18RikQ9D6C3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.38■■□□□ 1.01
3830403N18RikQ9D6C3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
3830403N18RikQ9D6C3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
3830403N18RikQ9D6C3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
3830403N18RikQ9D6C3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
3830403N18RikQ9D6C3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
3830403N18RikQ9D6C3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
3830403N18RikQ9D6C3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
3830403N18RikQ9D6C3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
3830403N18RikQ9D6C3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
3830403N18RikQ9D6C3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
3830403N18RikQ9D6C3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
3830403N18RikQ9D6C3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
3830403N18RikQ9D6C3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
3830403N18RikQ9D6C3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
3830403N18RikQ9D6C3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
3830403N18RikQ9D6C3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.36■■□□□ 1.01
3830403N18RikQ9D6C3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
3830403N18RikQ9D6C3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
3830403N18RikQ9D6C3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
3830403N18RikQ9D6C3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 Gm10232-201ENSMUST00000089221 720 ntBASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
3830403N18RikQ9D6C3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms