Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cldnd1Q9CQX5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cldnd1Q9CQX5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cldnd1Q9CQX5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldnd1Q9CQX5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cldnd1Q9CQX5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cldnd1Q9CQX5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd1Q9CQX5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldnd1Q9CQX5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldnd1Q9CQX5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldnd1Q9CQX5 Gm12933-201ENSMUST00000120203 872 ntBASIC21.03■□□□□ 0.96
Cldnd1Q9CQX5 Gm9988-201ENSMUST00000069786 435 ntBASIC21.03■□□□□ 0.96
Cldnd1Q9CQX5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldnd1Q9CQX5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cldnd1Q9CQX5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cldnd1Q9CQX5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldnd1Q9CQX5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cldnd1Q9CQX5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldnd1Q9CQX5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Cldnd1Q9CQX5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldnd1Q9CQX5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.02■□□□□ 0.96
Cldnd1Q9CQX5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cldnd1Q9CQX5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cldnd1Q9CQX5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cldnd1Q9CQX5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldnd1Q9CQX5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldnd1Q9CQX5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cldnd1Q9CQX5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cldnd1Q9CQX5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cldnd1Q9CQX5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldnd1Q9CQX5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21■□□□□ 0.95
Cldnd1Q9CQX5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21■□□□□ 0.95
Cldnd1Q9CQX5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldnd1Q9CQX5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldnd1Q9CQX5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.98■□□□□ 0.95
Cldnd1Q9CQX5 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.98■□□□□ 0.95
Cldnd1Q9CQX5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldnd1Q9CQX5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Cldnd1Q9CQX5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.98■□□□□ 0.95
Cldnd1Q9CQX5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.98■□□□□ 0.95
Cldnd1Q9CQX5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.98■□□□□ 0.95
Cldnd1Q9CQX5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.98■□□□□ 0.95
Cldnd1Q9CQX5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd1Q9CQX5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd1Q9CQX5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.95■□□□□ 0.95
Cldnd1Q9CQX5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cldnd1Q9CQX5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldnd1Q9CQX5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldnd1Q9CQX5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldnd1Q9CQX5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldnd1Q9CQX5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldnd1Q9CQX5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.94■□□□□ 0.94
Cldnd1Q9CQX5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms