Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.33■■□□□ 1
Rsph1Q8VIG3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Rsph1Q8VIG3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Smad6-203ENSMUST00000179458 273 ntBASIC21.32■■□□□ 1
Rsph1Q8VIG3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rsph1Q8VIG3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rsph1Q8VIG3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Rsph1Q8VIG3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rsph1Q8VIG3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
Rsph1Q8VIG3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rsph1Q8VIG3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rsph1Q8VIG3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.3■■□□□ 1
Rsph1Q8VIG3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rsph1Q8VIG3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rsph1Q8VIG3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.3■■□□□ 1
Rsph1Q8VIG3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rsph1Q8VIG3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rsph1Q8VIG3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rsph1Q8VIG3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph1Q8VIG3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Rsph1Q8VIG3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph1Q8VIG3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph1Q8VIG3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph1Q8VIG3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rsph1Q8VIG3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
Rsph1Q8VIG3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.29■■□□□ 1
Rsph1Q8VIG3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Rsph1Q8VIG3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph1Q8VIG3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.28■■□□□ 1
Rsph1Q8VIG3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.28■■□□□ 1
Rsph1Q8VIG3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rsph1Q8VIG3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph1Q8VIG3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph1Q8VIG3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rsph1Q8VIG3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph1Q8VIG3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph1Q8VIG3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph1Q8VIG3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rsph1Q8VIG3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rsph1Q8VIG3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.27■□□□□ 0.99
Rsph1Q8VIG3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rsph1Q8VIG3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph1Q8VIG3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Rsph1Q8VIG3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Mir6236-201ENSMUST00000184437 123 ntBASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Rsph1Q8VIG3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph1Q8VIG3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph1Q8VIG3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rsph1Q8VIG3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph1Q8VIG3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph1Q8VIG3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms