Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab40cQ8VHQ4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab40cQ8VHQ4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rab40cQ8VHQ4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Rab40cQ8VHQ4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab40cQ8VHQ4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab40cQ8VHQ4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Gm11687-201ENSMUST00000118911 886 ntBASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab40cQ8VHQ4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab40cQ8VHQ4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab40cQ8VHQ4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab40cQ8VHQ4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.55■□□□□ 0.24
Rab40cQ8VHQ4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab40cQ8VHQ4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.55■□□□□ 0.24
Rab40cQ8VHQ4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rab40cQ8VHQ4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.55■□□□□ 0.24
Rab40cQ8VHQ4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40cQ8VHQ4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40cQ8VHQ4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rab40cQ8VHQ4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab40cQ8VHQ4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.52■□□□□ 0.24
Rab40cQ8VHQ4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab40cQ8VHQ4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab40cQ8VHQ4 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.52■□□□□ 0.24
Rab40cQ8VHQ4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40cQ8VHQ4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40cQ8VHQ4 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.52■□□□□ 0.23
Rab40cQ8VHQ4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Rab40cQ8VHQ4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40cQ8VHQ4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40cQ8VHQ4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rab40cQ8VHQ4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms