Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.53■□□□□ 0.72
Lsm1Q8VC85 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm1Q8VC85 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm1Q8VC85 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm1Q8VC85 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm1Q8VC85 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm1Q8VC85 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm1Q8VC85 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.52■□□□□ 0.72
Lsm1Q8VC85 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm1Q8VC85 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm1Q8VC85 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lsm1Q8VC85 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lsm1Q8VC85 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm1Q8VC85 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm1Q8VC85 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm1Q8VC85 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm1Q8VC85 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm1Q8VC85 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm1Q8VC85 Gm10399-202ENSMUST00000202768 748 ntBASIC19.51■□□□□ 0.71
Lsm1Q8VC85 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm1Q8VC85 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm1Q8VC85 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm1Q8VC85 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Lsm1Q8VC85 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm1Q8VC85 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm1Q8VC85 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Lsm1Q8VC85 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lsm1Q8VC85 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm1Q8VC85 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.49■□□□□ 0.71
Lsm1Q8VC85 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm1Q8VC85 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lsm1Q8VC85 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm1Q8VC85 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm1Q8VC85 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm1Q8VC85 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm1Q8VC85 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm1Q8VC85 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.47■□□□□ 0.71
Lsm1Q8VC85 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lsm1Q8VC85 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm1Q8VC85 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm1Q8VC85 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm1Q8VC85 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm1Q8VC85 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm1Q8VC85 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm1Q8VC85 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm1Q8VC85 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.46■□□□□ 0.71
Lsm1Q8VC85 Gm10232-201ENSMUST00000089221 720 ntBASIC19.46■□□□□ 0.71
Lsm1Q8VC85 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm1Q8VC85 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm1Q8VC85 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm1Q8VC85 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm1Q8VC85 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm1Q8VC85 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm1Q8VC85 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm1Q8VC85 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm1Q8VC85 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lsm1Q8VC85 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm1Q8VC85 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm1Q8VC85 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm1Q8VC85 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm1Q8VC85 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms