Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubqln1Q8R317 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubqln1Q8R317 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubqln1Q8R317 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubqln1Q8R317 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.21■□□□□ 0.67
Ubqln1Q8R317 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubqln1Q8R317 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ubqln1Q8R317 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Gm14117-201ENSMUST00000122417 843 ntBASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubqln1Q8R317 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubqln1Q8R317 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.19■□□□□ 0.66
Ubqln1Q8R317 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ubqln1Q8R317 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubqln1Q8R317 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubqln1Q8R317 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ubqln1Q8R317 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubqln1Q8R317 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubqln1Q8R317 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubqln1Q8R317 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubqln1Q8R317 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubqln1Q8R317 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubqln1Q8R317 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubqln1Q8R317 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
Ubqln1Q8R317 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.17■□□□□ 0.66
Ubqln1Q8R317 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubqln1Q8R317 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubqln1Q8R317 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubqln1Q8R317 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Gm22238-201ENSMUST00000175222 88 ntBASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ubqln1Q8R317 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubqln1Q8R317 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubqln1Q8R317 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubqln1Q8R317 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubqln1Q8R317 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.14■□□□□ 0.65
Ubqln1Q8R317 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.14■□□□□ 0.65
Ubqln1Q8R317 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubqln1Q8R317 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ubqln1Q8R317 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ubqln1Q8R317 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.13■□□□□ 0.65
Ubqln1Q8R317 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.13■□□□□ 0.65
Ubqln1Q8R317 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln1Q8R317 Gm9870-201ENSMUST00000063874 645 ntBASIC19.13■□□□□ 0.65
Ubqln1Q8R317 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln1Q8R317 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Ubqln1Q8R317 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln1Q8R317 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubqln1Q8R317 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln1Q8R317 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln1Q8R317 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln1Q8R317 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.12■□□□□ 0.65
Ubqln1Q8R317 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ubqln1Q8R317 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.12■□□□□ 0.65
Ubqln1Q8R317 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubqln1Q8R317 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ubqln1Q8R317 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln1Q8R317 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln1Q8R317 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln1Q8R317 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.1■□□□□ 0.65
Ubqln1Q8R317 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln1Q8R317 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ubqln1Q8R317 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ubqln1Q8R317 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms