Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Chmp7Q8R1T1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC26.18■■□□□ 1.78
Chmp7Q8R1T1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Chmp7Q8R1T1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Chmp7Q8R1T1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Chmp7Q8R1T1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC26.17■■□□□ 1.78
Chmp7Q8R1T1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Chmp7Q8R1T1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Chmp7Q8R1T1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Chmp7Q8R1T1 Gm10493-201ENSMUST00000097270 612 ntBASIC26.16■■□□□ 1.78
Chmp7Q8R1T1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Chmp7Q8R1T1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Gm37415-201ENSMUST00000192265 2054 ntBASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Gm5913-201ENSMUST00000119397 1399 ntBASIC26.15■■□□□ 1.78
Chmp7Q8R1T1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Chmp7Q8R1T1 Smad6-203ENSMUST00000179458 273 ntBASIC26.14■■□□□ 1.78
Chmp7Q8R1T1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Chmp7Q8R1T1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
Chmp7Q8R1T1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC26.14■■□□□ 1.78
Chmp7Q8R1T1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC26.14■■□□□ 1.77
Chmp7Q8R1T1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Chmp7Q8R1T1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC26.14■■□□□ 1.77
Chmp7Q8R1T1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Chmp7Q8R1T1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Chmp7Q8R1T1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Chmp7Q8R1T1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC26.13■■□□□ 1.77
Chmp7Q8R1T1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Chmp7Q8R1T1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Chmp7Q8R1T1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Chmp7Q8R1T1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Chmp7Q8R1T1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Gm27045-201ENSMUST00000182145 1402 ntBASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC26.12■■□□□ 1.77
Chmp7Q8R1T1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Chmp7Q8R1T1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC26.11■■□□□ 1.77
Chmp7Q8R1T1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Chmp7Q8R1T1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Chmp7Q8R1T1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC26.11■■□□□ 1.77
Chmp7Q8R1T1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Chmp7Q8R1T1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Chmp7Q8R1T1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Chmp7Q8R1T1 Gm44949-201ENSMUST00000206423 1450 ntBASIC26.11■■□□□ 1.77
Chmp7Q8R1T1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Chmp7Q8R1T1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC26.09■■□□□ 1.77
Chmp7Q8R1T1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Chmp7Q8R1T1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
Chmp7Q8R1T1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chmp7Q8R1T1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chmp7Q8R1T1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Chmp7Q8R1T1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Chmp7Q8R1T1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Chmp7Q8R1T1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Chmp7Q8R1T1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC26.08■■□□□ 1.77
Chmp7Q8R1T1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Chmp7Q8R1T1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC26.08■■□□□ 1.77
Chmp7Q8R1T1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Chmp7Q8R1T1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Chmp7Q8R1T1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC26.07■■□□□ 1.76
Chmp7Q8R1T1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Chmp7Q8R1T1 Gm29257-201ENSMUST00000186115 639 ntBASIC26.07■■□□□ 1.76
Chmp7Q8R1T1 AC099934.2-201ENSMUST00000196389 70 ntBASIC26.07■■□□□ 1.76
Chmp7Q8R1T1 AC156953.1-201ENSMUST00000196953 70 ntBASIC26.07■■□□□ 1.76
Chmp7Q8R1T1 AC157822.2-201ENSMUST00000200291 70 ntBASIC26.07■■□□□ 1.76
Chmp7Q8R1T1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Chmp7Q8R1T1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms