Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.88■■□□□ 1.09
Rpp40Q8R1F9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.88■■□□□ 1.09
Rpp40Q8R1F9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Rpp40Q8R1F9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Rpp40Q8R1F9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rpp40Q8R1F9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rpp40Q8R1F9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rpp40Q8R1F9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Rpp40Q8R1F9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpp40Q8R1F9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp40Q8R1F9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.84■■□□□ 1.09
Rpp40Q8R1F9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.84■■□□□ 1.09
Rpp40Q8R1F9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rpp40Q8R1F9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rpp40Q8R1F9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rpp40Q8R1F9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rpp40Q8R1F9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rpp40Q8R1F9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rpp40Q8R1F9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.83■■□□□ 1.09
Rpp40Q8R1F9 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.83■■□□□ 1.09
Rpp40Q8R1F9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rpp40Q8R1F9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Rpp40Q8R1F9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Rpp40Q8R1F9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpp40Q8R1F9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpp40Q8R1F9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpp40Q8R1F9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpp40Q8R1F9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpp40Q8R1F9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rpp40Q8R1F9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpp40Q8R1F9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpp40Q8R1F9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Rpp40Q8R1F9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpp40Q8R1F9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rpp40Q8R1F9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpp40Q8R1F9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpp40Q8R1F9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpp40Q8R1F9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpp40Q8R1F9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Gm12821-201ENSMUST00000120022 600 ntBASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Rpp40Q8R1F9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpp40Q8R1F9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.79■■□□□ 1.08
Rpp40Q8R1F9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rpp40Q8R1F9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.79■■□□□ 1.08
Rpp40Q8R1F9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpp40Q8R1F9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpp40Q8R1F9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rpp40Q8R1F9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpp40Q8R1F9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rpp40Q8R1F9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.78■■□□□ 1.08
Rpp40Q8R1F9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rpp40Q8R1F9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rpp40Q8R1F9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpp40Q8R1F9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpp40Q8R1F9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
Rpp40Q8R1F9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.77■■□□□ 1.08
Rpp40Q8R1F9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpp40Q8R1F9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rpp40Q8R1F9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpp40Q8R1F9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpp40Q8R1F9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rpp40Q8R1F9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms