Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim31Q8R0K2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Gm22238-201ENSMUST00000175222 88 ntBASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim31Q8R0K2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim31Q8R0K2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim31Q8R0K2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim31Q8R0K2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim31Q8R0K2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim31Q8R0K2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim31Q8R0K2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim31Q8R0K2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim31Q8R0K2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim31Q8R0K2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim31Q8R0K2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim31Q8R0K2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim31Q8R0K2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim31Q8R0K2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim31Q8R0K2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim31Q8R0K2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim31Q8R0K2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim31Q8R0K2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim31Q8R0K2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim31Q8R0K2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim31Q8R0K2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim31Q8R0K2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim31Q8R0K2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim31Q8R0K2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim31Q8R0K2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim31Q8R0K2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim31Q8R0K2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim31Q8R0K2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim31Q8R0K2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim31Q8R0K2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Trim31Q8R0K2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim31Q8R0K2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim31Q8R0K2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim31Q8R0K2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim31Q8R0K2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim31Q8R0K2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim31Q8R0K2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim31Q8R0K2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim31Q8R0K2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim31Q8R0K2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim31Q8R0K2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim31Q8R0K2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms