Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h3Q8CHP0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Zc3h3Q8CHP0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h3Q8CHP0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Zc3h3Q8CHP0 Mir5133-201ENSMUST00000174955 77 ntBASIC20.19■□□□□ 0.82
Zc3h3Q8CHP0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.19■□□□□ 0.82
Zc3h3Q8CHP0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h3Q8CHP0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
Zc3h3Q8CHP0 Gm4968-201ENSMUST00000071458 858 ntBASIC20.19■□□□□ 0.82
Zc3h3Q8CHP0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Zc3h3Q8CHP0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h3Q8CHP0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h3Q8CHP0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h3Q8CHP0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h3Q8CHP0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Zc3h3Q8CHP0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h3Q8CHP0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Zc3h3Q8CHP0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Zc3h3Q8CHP0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Zc3h3Q8CHP0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zc3h3Q8CHP0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Zc3h3Q8CHP0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h3Q8CHP0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h3Q8CHP0 Gm7514-201ENSMUST00000209475 934 ntBASIC20.16■□□□□ 0.82
Zc3h3Q8CHP0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h3Q8CHP0 Reep4-203ENSMUST00000226563 1444 ntBASIC20.16■□□□□ 0.82
Zc3h3Q8CHP0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zc3h3Q8CHP0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h3Q8CHP0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.15■□□□□ 0.82
Zc3h3Q8CHP0 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.15■□□□□ 0.82
Zc3h3Q8CHP0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h3Q8CHP0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Zc3h3Q8CHP0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h3Q8CHP0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Zc3h3Q8CHP0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h3Q8CHP0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3h3Q8CHP0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Zc3h3Q8CHP0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Zc3h3Q8CHP0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Zc3h3Q8CHP0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h3Q8CHP0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h3Q8CHP0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.14■□□□□ 0.81
Zc3h3Q8CHP0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h3Q8CHP0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h3Q8CHP0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3h3Q8CHP0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Zc3h3Q8CHP0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Gm12527-201ENSMUST00000117967 564 ntBASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Gm7977-201ENSMUST00000193787 748 ntBASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3h3Q8CHP0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h3Q8CHP0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.12■□□□□ 0.81
Zc3h3Q8CHP0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Zc3h3Q8CHP0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
Zc3h3Q8CHP0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Zc3h3Q8CHP0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h3Q8CHP0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3h3Q8CHP0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Zc3h3Q8CHP0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h3Q8CHP0 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.11■□□□□ 0.81
Zc3h3Q8CHP0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h3Q8CHP0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Zc3h3Q8CHP0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3h3Q8CHP0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zc3h3Q8CHP0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zc3h3Q8CHP0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zc3h3Q8CHP0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3h3Q8CHP0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms