Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sox30Q8CGW4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sox30Q8CGW4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sox30Q8CGW4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sox30Q8CGW4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Sox30Q8CGW4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sox30Q8CGW4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Sox30Q8CGW4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sox30Q8CGW4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Sox30Q8CGW4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sox30Q8CGW4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sox30Q8CGW4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sox30Q8CGW4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sox30Q8CGW4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sox30Q8CGW4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sox30Q8CGW4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Sox30Q8CGW4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sox30Q8CGW4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.39■■□□□ 1.17
Sox30Q8CGW4 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.39■■□□□ 1.17
Sox30Q8CGW4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.38■■□□□ 1.17
Sox30Q8CGW4 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.38■■□□□ 1.17
Sox30Q8CGW4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sox30Q8CGW4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Sox30Q8CGW4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sox30Q8CGW4 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.37■■□□□ 1.17
Sox30Q8CGW4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sox30Q8CGW4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Sox30Q8CGW4 Gm45444-201ENSMUST00000211394 898 ntBASIC22.37■■□□□ 1.17
Sox30Q8CGW4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sox30Q8CGW4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sox30Q8CGW4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sox30Q8CGW4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Sox30Q8CGW4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sox30Q8CGW4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.35■■□□□ 1.17
Sox30Q8CGW4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sox30Q8CGW4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.34■■□□□ 1.17
Sox30Q8CGW4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.34■■□□□ 1.17
Sox30Q8CGW4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.34■■□□□ 1.17
Sox30Q8CGW4 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.34■■□□□ 1.17
Sox30Q8CGW4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox30Q8CGW4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox30Q8CGW4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox30Q8CGW4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox30Q8CGW4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox30Q8CGW4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox30Q8CGW4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.33■■□□□ 1.17
Sox30Q8CGW4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox30Q8CGW4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Sox30Q8CGW4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sox30Q8CGW4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Sox30Q8CGW4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Sox30Q8CGW4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Sox30Q8CGW4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.32■■□□□ 1.16
Sox30Q8CGW4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sox30Q8CGW4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sox30Q8CGW4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.31■■□□□ 1.16
Sox30Q8CGW4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sox30Q8CGW4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.31■■□□□ 1.16
Sox30Q8CGW4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.31■■□□□ 1.16
Sox30Q8CGW4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sox30Q8CGW4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sox30Q8CGW4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sox30Q8CGW4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sox30Q8CGW4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sox30Q8CGW4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sox30Q8CGW4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sox30Q8CGW4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Sox30Q8CGW4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sox30Q8CGW4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms