Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb7Q8CDY9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb7Q8CDY9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb7Q8CDY9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb7Q8CDY9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb7Q8CDY9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhb7Q8CDY9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb7Q8CDY9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb7Q8CDY9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb7Q8CDY9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb7Q8CDY9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb7Q8CDY9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb7Q8CDY9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb7Q8CDY9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhb7Q8CDY9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb7Q8CDY9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb7Q8CDY9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb7Q8CDY9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb7Q8CDY9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb7Q8CDY9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb7Q8CDY9 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.27■□□□□ 0.84
Pcdhb7Q8CDY9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb7Q8CDY9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdhb7Q8CDY9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb7Q8CDY9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb7Q8CDY9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb7Q8CDY9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb7Q8CDY9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb7Q8CDY9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb7Q8CDY9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb7Q8CDY9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb7Q8CDY9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb7Q8CDY9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.23■□□□□ 0.83
Pcdhb7Q8CDY9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb7Q8CDY9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb7Q8CDY9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.23■□□□□ 0.83
Pcdhb7Q8CDY9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb7Q8CDY9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb7Q8CDY9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb7Q8CDY9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcdhb7Q8CDY9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 264.5 ms