Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ska3Q8C263 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ska3Q8C263 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ska3Q8C263 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ska3Q8C263 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
Ska3Q8C263 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ska3Q8C263 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ska3Q8C263 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ska3Q8C263 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ska3Q8C263 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ska3Q8C263 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.08■□□□□ 0.64
Ska3Q8C263 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.08■□□□□ 0.64
Ska3Q8C263 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ska3Q8C263 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ska3Q8C263 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ska3Q8C263 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ska3Q8C263 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ska3Q8C263 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ska3Q8C263 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ska3Q8C263 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ska3Q8C263 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ska3Q8C263 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.07■□□□□ 0.64
Ska3Q8C263 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ska3Q8C263 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ska3Q8C263 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ska3Q8C263 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ska3Q8C263 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.06■□□□□ 0.64
Ska3Q8C263 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ska3Q8C263 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ska3Q8C263 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ska3Q8C263 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Ska3Q8C263 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ska3Q8C263 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ska3Q8C263 Iqck-206ENSMUST00000208658 2891 ntBASIC19.05■□□□□ 0.64
Ska3Q8C263 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ska3Q8C263 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.05■□□□□ 0.64
Ska3Q8C263 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.05■□□□□ 0.64
Ska3Q8C263 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ska3Q8C263 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ska3Q8C263 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ska3Q8C263 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
Ska3Q8C263 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.04■□□□□ 0.64
Ska3Q8C263 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ska3Q8C263 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ska3Q8C263 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ska3Q8C263 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ska3Q8C263 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ska3Q8C263 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ska3Q8C263 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.03■□□□□ 0.64
Ska3Q8C263 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
Ska3Q8C263 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ska3Q8C263 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ska3Q8C263 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ska3Q8C263 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ska3Q8C263 Gm12922-201ENSMUST00000120626 809 ntBASIC19.02■□□□□ 0.64
Ska3Q8C263 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ska3Q8C263 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ska3Q8C263 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ska3Q8C263 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Ska3Q8C263 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ska3Q8C263 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ska3Q8C263 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ska3Q8C263 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ska3Q8C263 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ska3Q8C263 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ska3Q8C263 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ska3Q8C263 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ska3Q8C263 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ska3Q8C263 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.01■□□□□ 0.63
Ska3Q8C263 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ska3Q8C263 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ska3Q8C263 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ska3Q8C263 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ska3Q8C263 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ska3Q8C263 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19■□□□□ 0.63
Ska3Q8C263 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19■□□□□ 0.63
Ska3Q8C263 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ska3Q8C263 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ska3Q8C263 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ska3Q8C263 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ska3Q8C263 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19■□□□□ 0.63
Ska3Q8C263 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ska3Q8C263 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ska3Q8C263 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19■□□□□ 0.63
Ska3Q8C263 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19■□□□□ 0.63
Ska3Q8C263 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ska3Q8C263 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ska3Q8C263 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ska3Q8C263 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.99■□□□□ 0.63
Ska3Q8C263 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Ska3Q8C263 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.99■□□□□ 0.63
Ska3Q8C263 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ska3Q8C263 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ska3Q8C263 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ska3Q8C263 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ska3Q8C263 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.99■□□□□ 0.63
Ska3Q8C263 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ska3Q8C263 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ska3Q8C263 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ska3Q8C263 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms