Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm4Q8BKA3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Srrm4Q8BKA3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.59■□□□□ 0.41
Srrm4Q8BKA3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.59■□□□□ 0.41
Srrm4Q8BKA3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm4Q8BKA3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm4Q8BKA3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm4Q8BKA3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Srrm4Q8BKA3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm4Q8BKA3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm4Q8BKA3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm4Q8BKA3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Srrm4Q8BKA3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.58■□□□□ 0.41
Srrm4Q8BKA3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm4Q8BKA3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.58■□□□□ 0.4
Srrm4Q8BKA3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm4Q8BKA3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.58■□□□□ 0.4
Srrm4Q8BKA3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Srrm4Q8BKA3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm4Q8BKA3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm4Q8BKA3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Srrm4Q8BKA3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm4Q8BKA3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Srrm4Q8BKA3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm4Q8BKA3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.57■□□□□ 0.4
Srrm4Q8BKA3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.57■□□□□ 0.4
Srrm4Q8BKA3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm4Q8BKA3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.57■□□□□ 0.4
Srrm4Q8BKA3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm4Q8BKA3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm4Q8BKA3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm4Q8BKA3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm4Q8BKA3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm4Q8BKA3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm4Q8BKA3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm4Q8BKA3 Gm12922-201ENSMUST00000120626 809 ntBASIC17.55■□□□□ 0.4
Srrm4Q8BKA3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.55■□□□□ 0.4
Srrm4Q8BKA3 Gm9870-201ENSMUST00000063874 645 ntBASIC17.55■□□□□ 0.4
Srrm4Q8BKA3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm4Q8BKA3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm4Q8BKA3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm4Q8BKA3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm4Q8BKA3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm4Q8BKA3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm4Q8BKA3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm4Q8BKA3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.54■□□□□ 0.4
Srrm4Q8BKA3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Gm7143-201ENSMUST00000222811 859 ntBASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Gm9847-201ENSMUST00000052528 599 ntBASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srrm4Q8BKA3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.52■□□□□ 0.4
Srrm4Q8BKA3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms