Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vrk1Q80X41 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.42■□□□□ 0.7
Vrk1Q80X41 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vrk1Q80X41 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vrk1Q80X41 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vrk1Q80X41 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.41■□□□□ 0.7
Vrk1Q80X41 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk1Q80X41 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk1Q80X41 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk1Q80X41 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Vrk1Q80X41 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk1Q80X41 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk1Q80X41 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk1Q80X41 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vrk1Q80X41 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vrk1Q80X41 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.4■□□□□ 0.7
Vrk1Q80X41 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vrk1Q80X41 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.4■□□□□ 0.7
Vrk1Q80X41 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Vrk1Q80X41 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vrk1Q80X41 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vrk1Q80X41 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.39■□□□□ 0.7
Vrk1Q80X41 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vrk1Q80X41 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vrk1Q80X41 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.39■□□□□ 0.69
Vrk1Q80X41 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.39■□□□□ 0.69
Vrk1Q80X41 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vrk1Q80X41 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vrk1Q80X41 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vrk1Q80X41 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vrk1Q80X41 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vrk1Q80X41 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Vrk1Q80X41 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vrk1Q80X41 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.38■□□□□ 0.69
Vrk1Q80X41 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vrk1Q80X41 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vrk1Q80X41 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vrk1Q80X41 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vrk1Q80X41 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Gm5874-201ENSMUST00000096101 508 ntBASIC19.37■□□□□ 0.69
Vrk1Q80X41 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vrk1Q80X41 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.37■□□□□ 0.69
Vrk1Q80X41 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vrk1Q80X41 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.36■□□□□ 0.69
Vrk1Q80X41 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.36■□□□□ 0.69
Vrk1Q80X41 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vrk1Q80X41 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Vrk1Q80X41 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vrk1Q80X41 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vrk1Q80X41 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vrk1Q80X41 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vrk1Q80X41 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vrk1Q80X41 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vrk1Q80X41 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vrk1Q80X41 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vrk1Q80X41 Spcs1-204ENSMUST00000226782 949 ntBASIC19.34■□□□□ 0.69
Vrk1Q80X41 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vrk1Q80X41 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Vrk1Q80X41 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.34■□□□□ 0.69
Vrk1Q80X41 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vrk1Q80X41 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vrk1Q80X41 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vrk1Q80X41 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vrk1Q80X41 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.33■□□□□ 0.69
Vrk1Q80X41 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.33■□□□□ 0.69
Vrk1Q80X41 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vrk1Q80X41 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.33■□□□□ 0.68
Vrk1Q80X41 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vrk1Q80X41 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Vrk1Q80X41 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vrk1Q80X41 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vrk1Q80X41 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vrk1Q80X41 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Vrk1Q80X41 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vrk1Q80X41 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.32■□□□□ 0.68
Vrk1Q80X41 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk1Q80X41 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk1Q80X41 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk1Q80X41 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vrk1Q80X41 Gm26833-201ENSMUST00000180899 440 ntBASIC19.32■□□□□ 0.68
Vrk1Q80X41 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms