Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.34■□□□□ 0.37
Rif1Q6PR54 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rif1Q6PR54 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.34■□□□□ 0.37
Rif1Q6PR54 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rif1Q6PR54 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rif1Q6PR54 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.34■□□□□ 0.37
Rif1Q6PR54 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rif1Q6PR54 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rif1Q6PR54 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rif1Q6PR54 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rif1Q6PR54 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rif1Q6PR54 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rif1Q6PR54 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rif1Q6PR54 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rif1Q6PR54 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rif1Q6PR54 Gm7514-201ENSMUST00000209475 934 ntBASIC17.32■□□□□ 0.36
Rif1Q6PR54 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rif1Q6PR54 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rif1Q6PR54 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rif1Q6PR54 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rif1Q6PR54 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rif1Q6PR54 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rif1Q6PR54 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rif1Q6PR54 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rif1Q6PR54 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rif1Q6PR54 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rif1Q6PR54 Gm6576-201ENSMUST00000169678 883 ntBASIC17.31■□□□□ 0.36
Rif1Q6PR54 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.31■□□□□ 0.36
Rif1Q6PR54 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.31■□□□□ 0.36
Rif1Q6PR54 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rif1Q6PR54 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.31■□□□□ 0.36
Rif1Q6PR54 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rif1Q6PR54 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rif1Q6PR54 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rif1Q6PR54 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.3■□□□□ 0.36
Rif1Q6PR54 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rif1Q6PR54 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rif1Q6PR54 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Rif1Q6PR54 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.3■□□□□ 0.36
Rif1Q6PR54 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Rif1Q6PR54 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rif1Q6PR54 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.29■□□□□ 0.36
Rif1Q6PR54 Gm13234-201ENSMUST00000120010 747 ntBASIC17.29■□□□□ 0.36
Rif1Q6PR54 Trmt13-210ENSMUST00000198454 880 ntBASIC17.29■□□□□ 0.36
Rif1Q6PR54 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rif1Q6PR54 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rif1Q6PR54 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rif1Q6PR54 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rif1Q6PR54 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.29■□□□□ 0.36
Rif1Q6PR54 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rif1Q6PR54 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rif1Q6PR54 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rif1Q6PR54 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rif1Q6PR54 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rif1Q6PR54 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rif1Q6PR54 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rif1Q6PR54 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.28■□□□□ 0.36
Rif1Q6PR54 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.28■□□□□ 0.36
Rif1Q6PR54 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Rif1Q6PR54 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rif1Q6PR54 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rif1Q6PR54 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rif1Q6PR54 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rif1Q6PR54 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.27■□□□□ 0.35
Rif1Q6PR54 Gm5408-201ENSMUST00000197998 747 ntBASIC17.27■□□□□ 0.35
Rif1Q6PR54 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.26■□□□□ 0.35
Rif1Q6PR54 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Gm9987-201ENSMUST00000069768 567 ntBASIC17.26■□□□□ 0.35
Rif1Q6PR54 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.26■□□□□ 0.35
Rif1Q6PR54 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.26■□□□□ 0.35
Rif1Q6PR54 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rif1Q6PR54 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rif1Q6PR54 Gm7290-201ENSMUST00000104990 617 ntBASIC17.25■□□□□ 0.35
Rif1Q6PR54 Gm12918-201ENSMUST00000120234 636 ntBASIC17.25■□□□□ 0.35
Rif1Q6PR54 Gm15710-201ENSMUST00000121821 636 ntBASIC17.25■□□□□ 0.35
Rif1Q6PR54 Gm5075-201ENSMUST00000196916 622 ntBASIC17.25■□□□□ 0.35
Rif1Q6PR54 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.25■□□□□ 0.35
Rif1Q6PR54 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.25■□□□□ 0.35
Rif1Q6PR54 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.25■□□□□ 0.35
Rif1Q6PR54 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rif1Q6PR54 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.25■□□□□ 0.35
Rif1Q6PR54 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rif1Q6PR54 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rif1Q6PR54 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.25■□□□□ 0.35
Rif1Q6PR54 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rif1Q6PR54 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.24■□□□□ 0.35
Rif1Q6PR54 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rif1Q6PR54 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rif1Q6PR54 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rif1Q6PR54 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.24■□□□□ 0.35
Rif1Q6PR54 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms