Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc3Q64519 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
Sdc3Q64519 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc3Q64519 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
Sdc3Q64519 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc3Q64519 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.43■□□□□ 0.7
Sdc3Q64519 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Sdc3Q64519 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.43■□□□□ 0.7
Sdc3Q64519 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc3Q64519 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc3Q64519 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc3Q64519 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Sdc3Q64519 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sdc3Q64519 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.42■□□□□ 0.7
Sdc3Q64519 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.42■□□□□ 0.7
Sdc3Q64519 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sdc3Q64519 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.42■□□□□ 0.7
Sdc3Q64519 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sdc3Q64519 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc3Q64519 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc3Q64519 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc3Q64519 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc3Q64519 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.41■□□□□ 0.7
Sdc3Q64519 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sdc3Q64519 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sdc3Q64519 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sdc3Q64519 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sdc3Q64519 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Sdc3Q64519 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.4■□□□□ 0.7
Sdc3Q64519 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Sdc3Q64519 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.4■□□□□ 0.7
Sdc3Q64519 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sdc3Q64519 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.39■□□□□ 0.7
Sdc3Q64519 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sdc3Q64519 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc3Q64519 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.39■□□□□ 0.69
Sdc3Q64519 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc3Q64519 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sdc3Q64519 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sdc3Q64519 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc3Q64519 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Sdc3Q64519 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc3Q64519 Gm27454-201ENSMUST00000185090 204 ntBASIC19.38■□□□□ 0.69
Sdc3Q64519 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc3Q64519 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sdc3Q64519 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Sdc3Q64519 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.37■□□□□ 0.69
Sdc3Q64519 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sdc3Q64519 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdc3Q64519 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sdc3Q64519 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdc3Q64519 Gm45417-201ENSMUST00000209533 758 ntBASIC19.37■□□□□ 0.69
Sdc3Q64519 Gm7143-201ENSMUST00000222811 859 ntBASIC19.37■□□□□ 0.69
Sdc3Q64519 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdc3Q64519 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sdc3Q64519 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.37■□□□□ 0.69
Sdc3Q64519 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.36■□□□□ 0.69
Sdc3Q64519 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Sdc3Q64519 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Sdc3Q64519 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.36■□□□□ 0.69
Sdc3Q64519 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Sdc3Q64519 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc3Q64519 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc3Q64519 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc3Q64519 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sdc3Q64519 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc3Q64519 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc3Q64519 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc3Q64519 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc3Q64519 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc3Q64519 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sdc3Q64519 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sdc3Q64519 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc3Q64519 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc3Q64519 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc3Q64519 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc3Q64519 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sdc3Q64519 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms