Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.89■□□□□ 0.77
Six3Q62233 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six3Q62233 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six3Q62233 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Six3Q62233 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six3Q62233 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six3Q62233 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six3Q62233 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six3Q62233 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six3Q62233 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six3Q62233 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Six3Q62233 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Six3Q62233 Gm10232-201ENSMUST00000089221 720 ntBASIC19.88■□□□□ 0.77
Six3Q62233 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Six3Q62233 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six3Q62233 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six3Q62233 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Six3Q62233 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.87■□□□□ 0.77
Six3Q62233 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six3Q62233 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Six3Q62233 Gm10399-202ENSMUST00000202768 748 ntBASIC19.87■□□□□ 0.77
Six3Q62233 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.87■□□□□ 0.77
Six3Q62233 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six3Q62233 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six3Q62233 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six3Q62233 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Six3Q62233 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six3Q62233 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Six3Q62233 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Six3Q62233 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six3Q62233 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six3Q62233 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Six3Q62233 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Six3Q62233 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.86■□□□□ 0.77
Six3Q62233 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six3Q62233 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Six3Q62233 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Six3Q62233 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.85■□□□□ 0.77
Six3Q62233 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.85■□□□□ 0.77
Six3Q62233 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six3Q62233 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.85■□□□□ 0.77
Six3Q62233 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six3Q62233 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.85■□□□□ 0.77
Six3Q62233 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Six3Q62233 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Six3Q62233 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six3Q62233 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six3Q62233 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six3Q62233 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Six3Q62233 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Six3Q62233 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.84■□□□□ 0.77
Six3Q62233 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.84■□□□□ 0.77
Six3Q62233 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Six3Q62233 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six3Q62233 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six3Q62233 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six3Q62233 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six3Q62233 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Six3Q62233 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.84■□□□□ 0.77
Six3Q62233 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.84■□□□□ 0.77
Six3Q62233 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Six3Q62233 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Six3Q62233 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Six3Q62233 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Six3Q62233 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Six3Q62233 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.83■□□□□ 0.76
Six3Q62233 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Six3Q62233 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six3Q62233 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Six3Q62233 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six3Q62233 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six3Q62233 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.82■□□□□ 0.76
Six3Q62233 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six3Q62233 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.82■□□□□ 0.76
Six3Q62233 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.82■□□□□ 0.76
Six3Q62233 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Six3Q62233 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six3Q62233 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Six3Q62233 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Six3Q62233 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six3Q62233 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six3Q62233 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.81■□□□□ 0.76
Six3Q62233 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six3Q62233 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Six3Q62233 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Six3Q62233 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six3Q62233 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Six3Q62233 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six3Q62233 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.79■□□□□ 0.76
Six3Q62233 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six3Q62233 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six3Q62233 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six3Q62233 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six3Q62233 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six3Q62233 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six3Q62233 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Six3Q62233 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.78■□□□□ 0.76
Six3Q62233 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Six3Q62233 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Six3Q62233 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms