Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six2Q62232 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six2Q62232 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six2Q62232 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Six2Q62232 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Six2Q62232 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Six2Q62232 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Six2Q62232 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Six2Q62232 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Six2Q62232 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Six2Q62232 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Six2Q62232 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Six2Q62232 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Six2Q62232 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Six2Q62232 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.78■■□□□ 1.08
Six2Q62232 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Six2Q62232 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Six2Q62232 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.77■■□□□ 1.08
Six2Q62232 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
Six2Q62232 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six2Q62232 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Six2Q62232 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Six2Q62232 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six2Q62232 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six2Q62232 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six2Q62232 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Six2Q62232 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Six2Q62232 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six2Q62232 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.75■■□□□ 1.07
Six2Q62232 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six2Q62232 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six2Q62232 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six2Q62232 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six2Q62232 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six2Q62232 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Six2Q62232 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Six2Q62232 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.74■■□□□ 1.07
Six2Q62232 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
Six2Q62232 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Six2Q62232 Gm9959-201ENSMUST00000068277 390 ntBASIC21.74■■□□□ 1.07
Six2Q62232 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Six2Q62232 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Six2Q62232 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Six2Q62232 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Six2Q62232 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.73■■□□□ 1.07
Six2Q62232 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six2Q62232 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Six2Q62232 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six2Q62232 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six2Q62232 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.72■■□□□ 1.07
Six2Q62232 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six2Q62232 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.72■■□□□ 1.07
Six2Q62232 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six2Q62232 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.71■■□□□ 1.07
Six2Q62232 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six2Q62232 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six2Q62232 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six2Q62232 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six2Q62232 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six2Q62232 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six2Q62232 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six2Q62232 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six2Q62232 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Six2Q62232 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.7■■□□□ 1.06
Six2Q62232 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.7■■□□□ 1.06
Six2Q62232 Gm7417-201ENSMUST00000192950 473 ntBASIC21.7■■□□□ 1.06
Six2Q62232 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Six2Q62232 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.7■■□□□ 1.06
Six2Q62232 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six2Q62232 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.7■■□□□ 1.06
Six2Q62232 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Six2Q62232 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six2Q62232 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six2Q62232 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six2Q62232 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.69■■□□□ 1.06
Six2Q62232 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six2Q62232 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six2Q62232 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six2Q62232 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Six2Q62232 Notumos-201ENSMUST00000151998 2659 ntBASIC21.69■■□□□ 1.06
Six2Q62232 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six2Q62232 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six2Q62232 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Six2Q62232 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six2Q62232 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six2Q62232 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six2Q62232 Etf1-202ENSMUST00000180351 108 ntBASIC21.68■■□□□ 1.06
Six2Q62232 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six2Q62232 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six2Q62232 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms