Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cacna1eQ61290 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cacna1eQ61290 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cacna1eQ61290 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1eQ61290 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1eQ61290 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1eQ61290 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1eQ61290 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1eQ61290 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.24■□□□□ 0.83
Cacna1eQ61290 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1eQ61290 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1eQ61290 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1eQ61290 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.24■□□□□ 0.83
Cacna1eQ61290 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cacna1eQ61290 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1eQ61290 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.23■□□□□ 0.83
Cacna1eQ61290 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cacna1eQ61290 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cacna1eQ61290 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1eQ61290 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Cacna1eQ61290 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1eQ61290 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Cacna1eQ61290 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.23■□□□□ 0.83
Cacna1eQ61290 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1eQ61290 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.22■□□□□ 0.83
Cacna1eQ61290 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1eQ61290 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cacna1eQ61290 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cacna1eQ61290 Gm37179-201ENSMUST00000194862 823 ntBASIC20.22■□□□□ 0.83
Cacna1eQ61290 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1eQ61290 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.22■□□□□ 0.83
Cacna1eQ61290 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1eQ61290 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1eQ61290 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1eQ61290 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1eQ61290 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.21■□□□□ 0.83
Cacna1eQ61290 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1eQ61290 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1eQ61290 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Cacna1eQ61290 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1eQ61290 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1eQ61290 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.2■□□□□ 0.82
Cacna1eQ61290 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.2■□□□□ 0.82
Cacna1eQ61290 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1eQ61290 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1eQ61290 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1eQ61290 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1eQ61290 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1eQ61290 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.19■□□□□ 0.82
Cacna1eQ61290 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1eQ61290 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1eQ61290 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1eQ61290 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.19■□□□□ 0.82
Cacna1eQ61290 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1eQ61290 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1eQ61290 Gm42642-201ENSMUST00000200683 355 ntBASIC20.18■□□□□ 0.82
Cacna1eQ61290 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1eQ61290 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1eQ61290 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1eQ61290 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1eQ61290 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1eQ61290 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1eQ61290 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1eQ61290 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Cacna1eQ61290 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1eQ61290 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1eQ61290 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.17■□□□□ 0.82
Cacna1eQ61290 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1eQ61290 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.16■□□□□ 0.82
Cacna1eQ61290 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.16■□□□□ 0.82
Cacna1eQ61290 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cacna1eQ61290 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.16■□□□□ 0.82
Cacna1eQ61290 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1eQ61290 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1eQ61290 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1eQ61290 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cacna1eQ61290 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.15■□□□□ 0.82
Cacna1eQ61290 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms