Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav6-2Q5R1I4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav6-2Q5R1I4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trav6-2Q5R1I4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-2Q5R1I4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trav6-2Q5R1I4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav6-2Q5R1I4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-2Q5R1I4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-2Q5R1I4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-2Q5R1I4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trav6-2Q5R1I4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Gm43060-201ENSMUST00000200621 289 ntBASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-2Q5R1I4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-2Q5R1I4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-2Q5R1I4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav6-2Q5R1I4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.89■□□□□ 0.45
Trav6-2Q5R1I4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-2Q5R1I4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-2Q5R1I4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-2Q5R1I4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-2Q5R1I4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav6-2Q5R1I4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-2Q5R1I4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.87■□□□□ 0.45
Trav6-2Q5R1I4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Trav6-2Q5R1I4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav6-2Q5R1I4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-2Q5R1I4 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.87■□□□□ 0.45
Trav6-2Q5R1I4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-2Q5R1I4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-2Q5R1I4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Trav6-2Q5R1I4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.86■□□□□ 0.45
Trav6-2Q5R1I4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-2Q5R1I4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-2Q5R1I4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav6-2Q5R1I4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-2Q5R1I4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav6-2Q5R1I4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Trav6-2Q5R1I4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav6-2Q5R1I4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-2Q5R1I4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-2Q5R1I4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-2Q5R1I4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trav6-2Q5R1I4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms