Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-2Q5R1I3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-2Q5R1I3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-2Q5R1I3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-2Q5R1I3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav7-2Q5R1I3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav7-2Q5R1I3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav7-2Q5R1I3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav7-2Q5R1I3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav7-2Q5R1I3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.02□□□□□ -0.01
Trav7-2Q5R1I3 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.02□□□□□ -0.01
Trav7-2Q5R1I3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav7-2Q5R1I3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7-2Q5R1I3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7-2Q5R1I3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Gm10399-202ENSMUST00000202768 748 ntBASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav7-2Q5R1I3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7-2Q5R1I3 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.96□□□□□ -0.01
Trav7-2Q5R1I3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav7-2Q5R1I3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav7-2Q5R1I3 Gm5812-201ENSMUST00000061073 957 ntBASIC14.96□□□□□ -0.01
Trav7-2Q5R1I3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7-2Q5R1I3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7-2Q5R1I3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav7-2Q5R1I3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7-2Q5R1I3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7-2Q5R1I3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 371.4 ms