Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Shisa3Q3UPR0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa3Q3UPR0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Shisa3Q3UPR0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Shisa3Q3UPR0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa3Q3UPR0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.54■□□□□ 0.4
Shisa3Q3UPR0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa3Q3UPR0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Shisa3Q3UPR0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Shisa3Q3UPR0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa3Q3UPR0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa3Q3UPR0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa3Q3UPR0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa3Q3UPR0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa3Q3UPR0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa3Q3UPR0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa3Q3UPR0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa3Q3UPR0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa3Q3UPR0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa3Q3UPR0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa3Q3UPR0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.51■□□□□ 0.39
Shisa3Q3UPR0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa3Q3UPR0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa3Q3UPR0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa3Q3UPR0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa3Q3UPR0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa3Q3UPR0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa3Q3UPR0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Shisa3Q3UPR0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa3Q3UPR0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Gm5921-201ENSMUST00000075898 882 ntBASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa3Q3UPR0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Shisa3Q3UPR0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa3Q3UPR0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa3Q3UPR0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Shisa3Q3UPR0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms