Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Naf1Q3UMQ8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Naf1Q3UMQ8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Naf1Q3UMQ8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Naf1Q3UMQ8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Naf1Q3UMQ8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.68■□□□□ 0.9
Naf1Q3UMQ8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.68■□□□□ 0.9
Naf1Q3UMQ8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Naf1Q3UMQ8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Naf1Q3UMQ8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Naf1Q3UMQ8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Naf1Q3UMQ8 Notumos-201ENSMUST00000151998 2659 ntBASIC20.66■□□□□ 0.9
Naf1Q3UMQ8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Naf1Q3UMQ8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Naf1Q3UMQ8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Naf1Q3UMQ8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Naf1Q3UMQ8 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.66■□□□□ 0.9
Naf1Q3UMQ8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Naf1Q3UMQ8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Naf1Q3UMQ8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Mir7075-201ENSMUST00000184187 82 ntBASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Naf1Q3UMQ8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Naf1Q3UMQ8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Naf1Q3UMQ8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.64■□□□□ 0.9
Naf1Q3UMQ8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Naf1Q3UMQ8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Naf1Q3UMQ8 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.64■□□□□ 0.89
Naf1Q3UMQ8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Naf1Q3UMQ8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.64■□□□□ 0.89
Naf1Q3UMQ8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Naf1Q3UMQ8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Naf1Q3UMQ8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Naf1Q3UMQ8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Naf1Q3UMQ8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Naf1Q3UMQ8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Naf1Q3UMQ8 Gm12251-201ENSMUST00000117893 792 ntBASIC20.63■□□□□ 0.89
Naf1Q3UMQ8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.63■□□□□ 0.89
Naf1Q3UMQ8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.63■□□□□ 0.89
Naf1Q3UMQ8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Naf1Q3UMQ8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Naf1Q3UMQ8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Naf1Q3UMQ8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Naf1Q3UMQ8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Naf1Q3UMQ8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Naf1Q3UMQ8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Naf1Q3UMQ8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Naf1Q3UMQ8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Naf1Q3UMQ8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Naf1Q3UMQ8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Naf1Q3UMQ8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.6■□□□□ 0.89
Naf1Q3UMQ8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.6■□□□□ 0.89
Naf1Q3UMQ8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Naf1Q3UMQ8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Naf1Q3UMQ8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Naf1Q3UMQ8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.58■□□□□ 0.89
Naf1Q3UMQ8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Naf1Q3UMQ8 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.58■□□□□ 0.89
Naf1Q3UMQ8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Naf1Q3UMQ8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Naf1Q3UMQ8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Naf1Q3UMQ8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Naf1Q3UMQ8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Naf1Q3UMQ8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.57■□□□□ 0.88
Naf1Q3UMQ8 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.57■□□□□ 0.88
Naf1Q3UMQ8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.57■□□□□ 0.88
Naf1Q3UMQ8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.57■□□□□ 0.88
Naf1Q3UMQ8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms