Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrrk1Q3UHC2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lrrk1Q3UHC2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrrk1Q3UHC2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.96■□□□□ 0.63
Lrrk1Q3UHC2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrk1Q3UHC2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrk1Q3UHC2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Gm12251-201ENSMUST00000117893 792 ntBASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrk1Q3UHC2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrk1Q3UHC2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrk1Q3UHC2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrk1Q3UHC2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrk1Q3UHC2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.92■□□□□ 0.62
Lrrk1Q3UHC2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrk1Q3UHC2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrk1Q3UHC2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrk1Q3UHC2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrk1Q3UHC2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Lrrk1Q3UHC2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrk1Q3UHC2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrk1Q3UHC2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.89■□□□□ 0.61
Lrrk1Q3UHC2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.89■□□□□ 0.61
Lrrk1Q3UHC2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrk1Q3UHC2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrk1Q3UHC2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrk1Q3UHC2 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Lrrk1Q3UHC2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.87■□□□□ 0.61
Lrrk1Q3UHC2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrk1Q3UHC2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms