Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ush2AQ2QI47 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ush2AQ2QI47 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ush2AQ2QI47 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ush2AQ2QI47 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ush2AQ2QI47 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ush2AQ2QI47 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ush2AQ2QI47 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ush2AQ2QI47 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ush2AQ2QI47 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ush2AQ2QI47 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ush2AQ2QI47 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ush2AQ2QI47 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ush2AQ2QI47 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ush2AQ2QI47 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ush2AQ2QI47 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Gm9987-201ENSMUST00000069768 567 ntBASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Zxda-201ENSMUST00000117281 2621 ntBASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ush2AQ2QI47 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 AC153504.1-201ENSMUST00000218379 2290 ntBASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ush2AQ2QI47 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ush2AQ2QI47 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Ush2AQ2QI47 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ush2AQ2QI47 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ush2AQ2QI47 Gm18101-201ENSMUST00000215769 548 ntBASIC11.21□□□□□ -0.61
Ush2AQ2QI47 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ush2AQ2QI47 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.21□□□□□ -0.61
Ush2AQ2QI47 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ush2AQ2QI47 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ush2AQ2QI47 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ush2AQ2QI47 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ush2AQ2QI47 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ush2AQ2QI47 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ush2AQ2QI47 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC11.21□□□□□ -0.62
Ush2AQ2QI47 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ush2AQ2QI47 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ush2AQ2QI47 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Gm11421-201ENSMUST00000122124 294 ntBASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ush2AQ2QI47 Gm4430-201ENSMUST00000192413 1943 ntBASIC11.2□□□□□ -0.62
Ush2AQ2QI47 AC166356.1-201ENSMUST00000228236 1426 ntBASIC11.19□□□□□ -0.62
Ush2AQ2QI47 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms