Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crnkl1P63154 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Crnkl1P63154 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Crnkl1P63154 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crnkl1P63154 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crnkl1P63154 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.98■□□□□ 0.79
Crnkl1P63154 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crnkl1P63154 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Crnkl1P63154 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Crnkl1P63154 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Crnkl1P63154 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Crnkl1P63154 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Crnkl1P63154 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Crnkl1P63154 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Crnkl1P63154 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Crnkl1P63154 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Crnkl1P63154 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.96■□□□□ 0.79
Crnkl1P63154 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Crnkl1P63154 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Crnkl1P63154 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Crnkl1P63154 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Crnkl1P63154 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Crnkl1P63154 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Crnkl1P63154 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.95■□□□□ 0.78
Crnkl1P63154 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Crnkl1P63154 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Crnkl1P63154 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Crnkl1P63154 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Crnkl1P63154 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Crnkl1P63154 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Crnkl1P63154 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Crnkl1P63154 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Crnkl1P63154 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Crnkl1P63154 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Crnkl1P63154 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Crnkl1P63154 Gm10420-201ENSMUST00000121713 882 ntBASIC19.93■□□□□ 0.78
Crnkl1P63154 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Crnkl1P63154 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Crnkl1P63154 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Crnkl1P63154 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Crnkl1P63154 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.93■□□□□ 0.78
Crnkl1P63154 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Crnkl1P63154 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Crnkl1P63154 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Crnkl1P63154 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.92■□□□□ 0.78
Crnkl1P63154 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Crnkl1P63154 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Crnkl1P63154 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Crnkl1P63154 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Crnkl1P63154 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Crnkl1P63154 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Crnkl1P63154 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Crnkl1P63154 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Crnkl1P63154 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Crnkl1P63154 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.91■□□□□ 0.78
Crnkl1P63154 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.91■□□□□ 0.78
Crnkl1P63154 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Crnkl1P63154 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Crnkl1P63154 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Crnkl1P63154 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Crnkl1P63154 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Crnkl1P63154 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Crnkl1P63154 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Crnkl1P63154 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Crnkl1P63154 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Crnkl1P63154 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Crnkl1P63154 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Crnkl1P63154 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.9■□□□□ 0.78
Crnkl1P63154 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Crnkl1P63154 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Crnkl1P63154 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Crnkl1P63154 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Crnkl1P63154 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Crnkl1P63154 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Crnkl1P63154 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Crnkl1P63154 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Crnkl1P63154 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Crnkl1P63154 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Crnkl1P63154 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Crnkl1P63154 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.88■□□□□ 0.77
Crnkl1P63154 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Crnkl1P63154 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.88■□□□□ 0.77
Crnkl1P63154 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Crnkl1P63154 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.87■□□□□ 0.77
Crnkl1P63154 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.87■□□□□ 0.77
Crnkl1P63154 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms