Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ybx1P62960 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.98■□□□□ 0.95
Ybx1P62960 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.97■□□□□ 0.95
Ybx1P62960 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ybx1P62960 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.97■□□□□ 0.95
Ybx1P62960 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ybx1P62960 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Ybx1P62960 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ybx1P62960 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.97■□□□□ 0.95
Ybx1P62960 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ybx1P62960 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ybx1P62960 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ybx1P62960 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ybx1P62960 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.96■□□□□ 0.95
Ybx1P62960 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ybx1P62960 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
Ybx1P62960 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ybx1P62960 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.96■□□□□ 0.95
Ybx1P62960 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ybx1P62960 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ybx1P62960 Spcs1-204ENSMUST00000226782 949 ntBASIC20.96■□□□□ 0.95
Ybx1P62960 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
Ybx1P62960 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ybx1P62960 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Ybx1P62960 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ybx1P62960 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ybx1P62960 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ybx1P62960 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.95■□□□□ 0.94
Ybx1P62960 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.95■□□□□ 0.94
Ybx1P62960 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ybx1P62960 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ybx1P62960 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ybx1P62960 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ybx1P62960 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ybx1P62960 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ybx1P62960 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ybx1P62960 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ybx1P62960 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ybx1P62960 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ybx1P62960 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ybx1P62960 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ybx1P62960 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ybx1P62960 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ybx1P62960 Gm26833-201ENSMUST00000180899 440 ntBASIC20.93■□□□□ 0.94
Ybx1P62960 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ybx1P62960 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ybx1P62960 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ybx1P62960 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.92■□□□□ 0.94
Ybx1P62960 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ybx1P62960 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ybx1P62960 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ybx1P62960 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ybx1P62960 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.92■□□□□ 0.94
Ybx1P62960 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.92■□□□□ 0.94
Ybx1P62960 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.91■□□□□ 0.94
Ybx1P62960 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx1P62960 Gm26571-201ENSMUST00000181399 666 ntBASIC20.91■□□□□ 0.94
Ybx1P62960 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.91■□□□□ 0.94
Ybx1P62960 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx1P62960 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx1P62960 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.91■□□□□ 0.94
Ybx1P62960 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx1P62960 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx1P62960 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx1P62960 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
Ybx1P62960 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx1P62960 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ybx1P62960 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx1P62960 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx1P62960 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.9■□□□□ 0.94
Ybx1P62960 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx1P62960 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx1P62960 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ybx1P62960 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx1P62960 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx1P62960 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ybx1P62960 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ybx1P62960 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx1P62960 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx1P62960 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx1P62960 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx1P62960 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ybx1P62960 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ybx1P62960 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.88■□□□□ 0.93
Ybx1P62960 Gm40848-201ENSMUST00000221998 324 ntBASIC20.88■□□□□ 0.93
Ybx1P62960 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ybx1P62960 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ybx1P62960 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx1P62960 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Ybx1P62960 Gm43060-201ENSMUST00000200621 289 ntBASIC20.87■□□□□ 0.93
Ybx1P62960 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx1P62960 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx1P62960 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx1P62960 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ybx1P62960 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx1P62960 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx1P62960 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx1P62960 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ybx1P62960 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ybx1P62960 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms