Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RoraP51448 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RoraP51448 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RoraP51448 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.19■□□□□ 0.66
RoraP51448 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RoraP51448 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RoraP51448 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.17■□□□□ 0.66
RoraP51448 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RoraP51448 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.17■□□□□ 0.66
RoraP51448 Gm6139-201ENSMUST00000079261 882 ntBASIC19.17■□□□□ 0.66
RoraP51448 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RoraP51448 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RoraP51448 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.17■□□□□ 0.66
RoraP51448 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RoraP51448 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RoraP51448 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RoraP51448 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RoraP51448 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RoraP51448 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.16■□□□□ 0.66
RoraP51448 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RoraP51448 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RoraP51448 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.16■□□□□ 0.66
RoraP51448 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.16■□□□□ 0.66
RoraP51448 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RoraP51448 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RoraP51448 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RoraP51448 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
RoraP51448 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RoraP51448 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RoraP51448 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RoraP51448 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.15■□□□□ 0.66
RoraP51448 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RoraP51448 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RoraP51448 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.15■□□□□ 0.66
RoraP51448 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RoraP51448 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RoraP51448 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.15■□□□□ 0.66
RoraP51448 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RoraP51448 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RoraP51448 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
RoraP51448 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
RoraP51448 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.14■□□□□ 0.66
RoraP51448 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.14■□□□□ 0.66
RoraP51448 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
RoraP51448 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RoraP51448 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RoraP51448 Gm43530-201ENSMUST00000195920 274 ntBASIC19.14■□□□□ 0.65
RoraP51448 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RoraP51448 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RoraP51448 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.14■□□□□ 0.65
RoraP51448 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RoraP51448 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RoraP51448 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.13■□□□□ 0.65
RoraP51448 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RoraP51448 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RoraP51448 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RoraP51448 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RoraP51448 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RoraP51448 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RoraP51448 Mir7075-201ENSMUST00000184187 82 ntBASIC19.12■□□□□ 0.65
RoraP51448 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RoraP51448 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RoraP51448 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RoraP51448 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RoraP51448 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RoraP51448 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RoraP51448 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.11■□□□□ 0.65
RoraP51448 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RoraP51448 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RoraP51448 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
RoraP51448 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.11■□□□□ 0.65
RoraP51448 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RoraP51448 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.11■□□□□ 0.65
RoraP51448 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RoraP51448 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RoraP51448 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RoraP51448 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RoraP51448 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RoraP51448 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RoraP51448 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.1■□□□□ 0.65
RoraP51448 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RoraP51448 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms