Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srp9P49962 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.16■□□□□ 0.34
Srp9P49962 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.16■□□□□ 0.34
Srp9P49962 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srp9P49962 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp9P49962 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp9P49962 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Srp9P49962 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Srp9P49962 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Srp9P49962 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Srp9P49962 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.15■□□□□ 0.34
Srp9P49962 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.15■□□□□ 0.34
Srp9P49962 Gm45444-201ENSMUST00000211394 898 ntBASIC17.15■□□□□ 0.34
Srp9P49962 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp9P49962 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Srp9P49962 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp9P49962 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp9P49962 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srp9P49962 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.14■□□□□ 0.34
Srp9P49962 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Srp9P49962 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp9P49962 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Srp9P49962 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.14■□□□□ 0.33
Srp9P49962 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Srp9P49962 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Srp9P49962 Gm5921-201ENSMUST00000075898 882 ntBASIC17.14■□□□□ 0.33
Srp9P49962 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Srp9P49962 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.14■□□□□ 0.33
Srp9P49962 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp9P49962 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp9P49962 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srp9P49962 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Srp9P49962 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Srp9P49962 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.13■□□□□ 0.33
Srp9P49962 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srp9P49962 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp9P49962 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Srp9P49962 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp9P49962 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Srp9P49962 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.12■□□□□ 0.33
Srp9P49962 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Srp9P49962 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp9P49962 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp9P49962 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp9P49962 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp9P49962 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srp9P49962 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.12■□□□□ 0.33
Srp9P49962 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Srp9P49962 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.12■□□□□ 0.33
Srp9P49962 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.12■□□□□ 0.33
Srp9P49962 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp9P49962 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp9P49962 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp9P49962 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp9P49962 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.11■□□□□ 0.33
Srp9P49962 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp9P49962 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp9P49962 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp9P49962 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srp9P49962 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srp9P49962 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp9P49962 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp9P49962 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp9P49962 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Srp9P49962 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp9P49962 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp9P49962 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp9P49962 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srp9P49962 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Srp9P49962 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp9P49962 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Srp9P49962 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp9P49962 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.09■□□□□ 0.33
Srp9P49962 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Srp9P49962 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp9P49962 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Srp9P49962 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp9P49962 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms