Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
GdnfP48540 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GdnfP48540 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.69■□□□□ 0.42
GdnfP48540 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GdnfP48540 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GdnfP48540 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GdnfP48540 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GdnfP48540 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GdnfP48540 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
GdnfP48540 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GdnfP48540 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GdnfP48540 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.68■□□□□ 0.42
GdnfP48540 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GdnfP48540 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GdnfP48540 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GdnfP48540 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.68■□□□□ 0.42
GdnfP48540 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GdnfP48540 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GdnfP48540 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GdnfP48540 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 Gm45444-201ENSMUST00000211394 898 ntBASIC17.67■□□□□ 0.42
GdnfP48540 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GdnfP48540 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GdnfP48540 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GdnfP48540 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GdnfP48540 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.66■□□□□ 0.42
GdnfP48540 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GdnfP48540 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GdnfP48540 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GdnfP48540 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GdnfP48540 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GdnfP48540 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GdnfP48540 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GdnfP48540 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GdnfP48540 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GdnfP48540 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GdnfP48540 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GdnfP48540 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GdnfP48540 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
GdnfP48540 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GdnfP48540 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.64■□□□□ 0.42
GdnfP48540 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GdnfP48540 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
GdnfP48540 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GdnfP48540 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GdnfP48540 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
GdnfP48540 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
GdnfP48540 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.64■□□□□ 0.41
GdnfP48540 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GdnfP48540 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GdnfP48540 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GdnfP48540 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GdnfP48540 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GdnfP48540 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.63■□□□□ 0.41
GdnfP48540 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GdnfP48540 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
GdnfP48540 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
GdnfP48540 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GdnfP48540 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GdnfP48540 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GdnfP48540 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.62■□□□□ 0.41
GdnfP48540 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GdnfP48540 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GdnfP48540 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GdnfP48540 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GdnfP48540 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GdnfP48540 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GdnfP48540 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GdnfP48540 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GdnfP48540 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GdnfP48540 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms