Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccl5P30882 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccl5P30882 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ccl5P30882 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccl5P30882 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccl5P30882 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.43■■□□□ 1.02
Ccl5P30882 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccl5P30882 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccl5P30882 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Ccl5P30882 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccl5P30882 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ccl5P30882 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.41■■□□□ 1.02
Ccl5P30882 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccl5P30882 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ccl5P30882 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccl5P30882 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.41■■□□□ 1.02
Ccl5P30882 Gm7514-201ENSMUST00000209475 934 ntBASIC21.41■■□□□ 1.02
Ccl5P30882 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
Ccl5P30882 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ccl5P30882 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccl5P30882 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccl5P30882 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ccl5P30882 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl5P30882 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Ccl5P30882 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl5P30882 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.4■■□□□ 1.02
Ccl5P30882 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.4■■□□□ 1.02
Ccl5P30882 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl5P30882 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ccl5P30882 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ccl5P30882 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl5P30882 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl5P30882 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
Ccl5P30882 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl5P30882 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccl5P30882 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.39■■□□□ 1.01
Ccl5P30882 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Ccl5P30882 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccl5P30882 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccl5P30882 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.38■■□□□ 1.01
Ccl5P30882 Reep4-203ENSMUST00000226563 1444 ntBASIC21.38■■□□□ 1.01
Ccl5P30882 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccl5P30882 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccl5P30882 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccl5P30882 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.38■■□□□ 1.01
Ccl5P30882 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccl5P30882 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccl5P30882 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ccl5P30882 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.37■■□□□ 1.01
Ccl5P30882 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.37■■□□□ 1.01
Ccl5P30882 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccl5P30882 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccl5P30882 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.36■■□□□ 1.01
Ccl5P30882 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.36■■□□□ 1.01
Ccl5P30882 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.36■■□□□ 1.01
Ccl5P30882 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl5P30882 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl5P30882 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl5P30882 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl5P30882 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ccl5P30882 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl5P30882 Gm12527-201ENSMUST00000117967 564 ntBASIC21.34■■□□□ 1.01
Ccl5P30882 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.34■■□□□ 1.01
Ccl5P30882 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.34■■□□□ 1.01
Ccl5P30882 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccl5P30882 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccl5P30882 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl5P30882 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl5P30882 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl5P30882 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl5P30882 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.33■■□□□ 1.01
Ccl5P30882 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.33■■□□□ 1.01
Ccl5P30882 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl5P30882 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl5P30882 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ccl5P30882 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccl5P30882 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Ccl5P30882 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccl5P30882 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl5P30882 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl5P30882 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl5P30882 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Ccl5P30882 Gm7977-201ENSMUST00000193787 748 ntBASIC21.32■■□□□ 1
Ccl5P30882 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl5P30882 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.32■■□□□ 1
Ccl5P30882 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl5P30882 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ccl5P30882 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.31■■□□□ 1
Ccl5P30882 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.31■■□□□ 1
Ccl5P30882 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl5P30882 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.31■■□□□ 1
Ccl5P30882 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Ccl5P30882 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccl5P30882 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl5P30882 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl5P30882 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl5P30882 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl5P30882 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccl5P30882 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccl5P30882 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms